Genome Architecture Archives

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Project Title	Project Number	Contact PI / Project Leader	Organization Name	Publications	TDCC Status
Bi-functional photo-crosslinking (BFPX) for genome-wide study of protein-nucleic acid interactions	HG012419	CHEN, LIN	UNIVERSITY OF SOUTHERN CALIFORNIA	View publication	Active
Extensive multiplexing of protein nucleic-acid interactions to comprehensively study gene expression regulation from chromatin to mRNA degradation	HG012216	JOVANOVIC, MARKO (contact); GUTTMAN, MITCHELL	COLUMBIA UNIV NEW YORK MORNINGSIDE	View publication	Active
Mapping the dynamics of mouse neurogenesis in autism models using high-resolution genomic barcoding technologies	HG012357	KALHOR, REZA	JOHNS HOPKINS UNIVERSITY	View publication	Active
A scalable kit-based assay for multi-omic analyses of transcriptional protein binding and chromatin interactions from ultra-low input frozen and FFPE samples at single-cell resolution	HG011897	SCHMITT, ANTHONY	ARIMA GENOMICS, INC.	View publication	Active
Bacteriophage Mu as Tool to Study Genome Organization in Bacteria and Eukaryotes	HG011838	HARSHEY, RASIKA M (contact); FREDDOLINO, PETER L	UNIVERSITY OF TEXAS, AUSTIN	View publication	Active
High-throughput development and characterization of compact tools for transcriptional and chromatin perturbations	HG011866	BINTU, LACRAMIOARA (contact); BASSIK, MICHAEL C	STANFORD UNIVERSITY	View publication	Active
Development of methods for multi-omic analysis of DNA methylation and chromatin architecture in single cells	HG010634	ECKER, JOSEPH R (contact); DIXON, JESSE R	SALK INSTITUTE FOR BIOLOGICAL STUDIES	View publication	Active
A single cell spatial genomics platform for multi-modal characterization of tissue organization	HG010647	CHEN, FEI (contact); MACOSKO, EVAN Z	BROAD INSTITUTE, INC.	View publication	Active
Integrative single-cell spatial genomic, transcriptomic, and epigenetic imaging in mammalian tissue	HG011245	WANG, SIYUAN	YALE UNIVERSITY	View publication	Active
Massively Parallel Single Cell Detection of Rare Variants with Split-Pool Combinatorial Indexing	HG011229	KENNEDY, SCOTT ROBERT (contact); SEELIG, GEORG	UNIVERSITY OF WASHINGTON	View publication	Complete