Project Title |
Project Number |
Contact PI / Project Leader |
Organization Name |
Publications |
TDCC Status |
A quick, and robust, and unbiased platform for circular RNAs isolation, discovery and profiling. |
HG013073 |
KHADE, PRASHANT K |
RIBO-THERAPEUTICS LLC |
View publication |
Active |
Post-translational phenotypic profiling through nucleotide barcode sequencing |
HG012991 |
INGOLIA, NICHOLAS T |
UNIVERSITY OF CALIFORNIA BERKELEY |
View publication |
Active |
Decoding global RNP topologies in splicing regulation |
HG012928 |
LU, ZHIPENG |
UNIVERSITY OF SOUTHERN CALIFORNIA |
View publication |
Active |
Next generation massively multiplexed combinatorial genetic screens |
HG012351 |
MALI, PRASHANT (contact); IDEKER, TREY |
UNIVERSITY OF CALIFORNIA, SAN DIEGO |
View publication |
Active |
Mechanisms of Transcriptional Control Revealed by Nascent Transcript Sequencing |
HG007173 |
CHURCHMAN, LEE STIRLING |
HARVARD MEDICAL SCHOOL |
View publication |
Active |
Bi-functional photo-crosslinking (BFPX) for genome-wide study of protein-nucleic acid interactions |
HG012419 |
CHEN, LIN |
UNIVERSITY OF SOUTHERN CALIFORNIA |
View publication |
Active |
Extensive multiplexing of protein nucleic-acid interactions to comprehensively study gene expression regulation from chromatin to mRNA degradation |
HG012216 |
JOVANOVIC, MARKO (contact); GUTTMAN, MITCHELL |
COLUMBIA UNIV NEW YORK MORNINGSIDE |
View publication |
Active |
Mapping the dynamics of mouse neurogenesis in autism models using high-resolution genomic barcoding technologies |
HG012357 |
KALHOR, REZA |
JOHNS HOPKINS UNIVERSITY |
View publication |
Active |
Targets and functions of the mammalian snoRNAome |
HG012780 |
PAN, TAO (contact); HE, CHUAN |
UNIVERSITY OF CHICAGO |
View publication |
Active |
CRISPR-based genome tagging of iPS Cells for stain-free multicolor live cell analysis |
HG012241 |
PEREZ-LEAL, OSCAR |
TEMPLE UNIV OF THE COMMONWEALTH |
View publication |
Active |
Single-cell and single-molecule profiling of protein-DNA interactions by MACHA |
HG012423 |
POTT, SEBASTIAN (contact); IKEGAMI, KOHTA |
UNIVERSITY OF CHICAGO |
View publication |
Active |
Methods for Mapping Genetic Regulatory Elements in Single Cells and Single Molecules |
HG012383 |
STREETS, AARON |
UNIVERSITY OF CALIFORNIA BERKELEY |
View publication |
Active |
High-throughput analysis of the effects of gene promoters and chromosomal environments on single-cell gene expression |
HG012304 |
COHEN, BARAK A |
WASHINGTON UNIVERSITY |
View publication |
Active |
A scalable kit-based assay for multi-omic analyses of transcriptional protein binding and chromatin interactions from ultra-low input frozen and FFPE samples at single-cell resolution |
HG011897 |
SCHMITT, ANTHONY |
ARIMA GENOMICS, INC. |
View publication |
Active |
High-throughput detection of transcriptomic and epitranscriptomic variation and kinetics using MarathonRT |
HG011868 |
PYLE, ANNA MARIE (contact); GRAVELEY, BRENTON R |
YALE UNIVERSITY |
View publication |
Active |
STAMP technology to enable single-cell and isoform-sensitive detection of RBP sites |
HG011864 |
YEO, EUGENE WEI-MING |
UNIVERSITY OF CALIFORNIA, SAN DIEGO |
View publication |
Active |
High-throughput development and characterization of compact tools for transcriptional and chromatin perturbations |
HG011866 |
BINTU, LACRAMIOARA (contact); BASSIK, MICHAEL C |
STANFORD UNIVERSITY |
View publication |
Active |
Protein tagging at scale to enable functional genomic studies |
HG011855 |
CHAVEZ, ALEJANDRO |
COLUMBIA UNIVERSITY HEALTH SCIENCES |
View publication |
Active |
Mapping gene-by-environment interactions using multiplexed single cell RNA-sequencing |
HG011239 |
YE, CHUN JIMMIE |
UNIVERSITY OF CALIFORNIA, SAN FRANCISCO |
View publication |
Active |
RNA targeting tools with novel specific RNA-guided RNA-targeting CRISPR effectors |
HG011857 |
GOOTENBERG, JONATHAN SAMUEL (contact); ABUDAYYEH, OMAR O |
MASSACHUSETTS INSTITUTE OF TECHNOLOGY |
View publication |
Complete |
Arrayed single-cell readout of pooled genetic perturbation libraries |
HG009283 |
BLAINEY, PAUL CLARK |
BROAD INSTITUTE, INC. |
View publication |
Complete |
Next-generation Functional Genetic Screening of Un-screenable Traits |
HG009285 |
MALI, PRASHANT (contact); TAMAYO, PABLO ; ZHANG, KUN |
UNIVERSITY OF CALIFORNIA, SAN DIEGO |
View publication |
Complete |
Programmable RNA-targeting tools |
HG009761 |
ZHANG, FENG |
BROAD INSTITUTE, INC. |
View publication |
Complete |
AVATAR: highly parallel analysis of variation in transcription factors and their DNA binding sites |
HG010200 |
BULYK, MARTHA L |
BRIGHAM AND WOMEN’S HOSPITAL |
View publication |
Complete |
Circular RNA as a platform for genome-wide microRNA sponge libraries |
HG011214 |
PICKERING, BRIAN FREDERICK |
CHIMERNA THERAPEUTICS INC. |
View publication |
Complete |
TempO-Seq Profiling of RNA Epitranscriptomic Modifications |
HG009763 |
SELIGMANN, BRUCE E. |
BIOSPYDER TECHNOLOGIES, INC. |
View publication |
Complete |