RNA

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Project Title Project Number Contact PI / Project Leader Organization Name Publications TDCC Status
TRIPODS: Transcriptome, RNA modifications, and Integrated Proteomics of Dynamic Synapses in the Mammalian Brain HG014877 ZHAO, BOXUAN UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN View publication Active
Computational and experimental approaches to decode domain-specific protein-RNA interactions HG014077 ZHANG, CHAOLIN (contact); WANG, LEI COLUMBIA UNIVERSITY View publication Active
Functional RNA elements in the human genome HG004659 YEO, EUGENE WEI-MING (contact); CORBETT, KEVIN DANIEL UNIVERSITY OF CALIFORNIA, SAN DIEGO View publication Active
Preparation of sequencing libraries for multi-analyte analysis of RNAs HG013284 KAZAKOV, SERGEI A REALSEQ BIOSCIENCES, INC. View publication Active
Transcriptomic characterization of membraneless organelles with scalable resolution HG013495 FEI, JINGYI UNIVERSITY OF CHICAGO View publication Active
Genome-wide assessment of transcriptional state history HG013472 BREUSS, MARTIN WERNER UNIVERSITY OF COLORADO DENVER View publication Active
Mapping proximal and distal splicing-regulatory elements HG012359 ZHANG, CHAOLIN COLUMBIA UNIVERSITY HEALTH SCIENCES View publication Active
Targets and functions of the mammalian snoRNAome HG012780 PAN, TAO (contact); HE, CHUAN UNIVERSITY OF CHICAGO View publication Active
A rapid method for global and targeted miRNA next generation sequencing HG013444 RAO, VARSHA CLARET BIOSCIENCE, LLC View publication Complete
A quick, and robust, and unbiased platform for circular RNAs isolation, discovery and profiling. HG013073 KHADE, PRASHANT K RIBO-THERAPEUTICS LLC View publication Complete
Rapid NGS Method for Mapping of the Epitranscriptome HG012534 STENGEL, GUDRUN ALIDA BIOSCIENCES, INC. View publication Complete
Multiplexed Analysis of the Epitranscriptome HG012170 STENGEL, GUDRUN ALIDA BIOSCIENCES, INC. View publication Complete
High-throughput detection of transcriptomic and epitranscriptomic variation and kinetics using MarathonRT HG011868 PYLE, ANNA MARIE (contact); GRAVELEY, BRENTON R YALE UNIVERSITY View publication Complete
RNA targeting tools with novel specific RNA-guided RNA-targeting CRISPR effectors HG011857 GOOTENBERG, JONATHAN SAMUEL (contact); ABUDAYYEH, OMAR O MASSACHUSETTS INSTITUTE OF TECHNOLOGY View publication Complete
Programmable RNA-targeting tools HG009761 ZHANG, FENG BROAD INSTITUTE, INC. View publication Complete
Circular RNA as a platform for genome-wide microRNA sponge libraries HG011214 PICKERING, BRIAN FREDERICK CHIMERNA THERAPEUTICS INC. View publication Complete
TempO-Seq Profiling of RNA Epitranscriptomic Modifications HG009763 SELIGMANN, BRUCE E. BIOSPYDER TECHNOLOGIES, INC. View publication Complete
Mapping gene-by-environment interactions using multiplexed single cell RNA-sequencing HG011239 YE, CHUN JIMMIE UNIVERSITY OF CALIFORNIA, SAN FRANCISCO View publication Complete

in conjunction with

The Technology Development Coordinating Center is supported by NHGRI Project U24HG011735 and The Jackson Laboratory.

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