Spatial Genomics Archives

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Project Title	Project Number	Contact PI / Project Leader	Organization Name	Publications	TDCC Status
Transcriptomic characterization of membraneless organelles with scalable resolution	HG013495	FEI, JINGYI	UNIVERSITY OF CHICAGO	View publication	Active
Pioneering assays for spatially-resolved single-cell multiomics	HG013294	PHAM, LIN	SURVEY GENOMICS, INC.	View publication	Active
Smart Laser Capturing Microscope for Genome Wide Single Cell Spatial Transcriptomics	HG014004	CANG, HU (contact); SUN, SHA	UNIVERSITY OF CALIFORNIA-IRVINE	View publication	Active
Expansion genomics for high-resolution single-cell and spatial epigenomics	HG013679	BUENROSTRO, JASON DANIEL	HARVARD UNIVERSITY	View publication	Active
Developing next-generation high-content image-based genetic screens for multi-omic spatial phenotypes	HG013503	WANG, SIYUAN	YALE UNIVERSITY	View publication	Active
A platform for scalable spatial single cell genomics	HG010647	CHEN, FEI (contact); MACOSKO, EVAN Z	BROAD INSTITUTE, INC.	View publication	Active
Whole organ transcriptome reconstruction by dimensionality reduced fluorescent in situ hybridization	HG012925	WOLLMAN, ROY (contact); LI, JINGYI JESSICA	UNIVERSITY OF CALIFORNIA LOS ANGELES	View publication	Active
Multimodal Analysis of the Genome Architecture Using Expansion Microscopy	HG012969	GIRALDEZ, ANTONIO J (contact); BEWERSDORF, JOERG ; WANG, SIYUAN	YALE UNIVERSITY	View publication	Active
Spatially Resolved Molecular Measurement of Biomolecular Condensates	HG013358	CHEN, HAIQI	UT SOUTHWESTERN MEDICAL CENTER	View publication	Active
Integrated experimental and statistical tools for ultra-high-throughput spatial transcriptomics	HG013180	HAN, HEE-SUN	UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN	View publication	Active
Light-Seq: Spatially targeted profiling of transcriptomic states in cells and tissue	HG012926	YIN, PENG	HARVARD UNIVERSITY	View publication	Active
In vivo Perturb-map: scalable genetic screens with single-cell and spatial resolution in intact tissues	HG012819	JIN, XIN	SCRIPPS RESEARCH INSTITUTE, THE	View publication	Active
Orthocoding for Spatial Sequencing	HG011231	SALZMAN, JULIA; FORDYCE, POLLY MORRELL; ROHATGI, RAJAT	STANFORD UNIVERSITY	View publication	Complete
A single cell spatial genomics platform for multi-modal characterization of tissue organization	HG010647	CHEN, FEI (contact); MACOSKO, EVAN Z	BROAD INSTITUTE, INC.	View publication	Complete
Integrative single-cell spatial genomic, transcriptomic, and epigenetic imaging in mammalian tissue	HG011245	WANG, SIYUAN	YALE UNIVERSITY	View publication	Complete