Spatial Genomics

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Project Title Project Number Contact PI / Project Leader Organization Name Publications TDCC Status
NextGen Spatial Multi-omics Technologies HG014032 VICKOVIC, SANJA NEW YORK GENOME CENTER View publication Active
Transcriptomic characterization of membraneless organelles with scalable resolution HG013495 FEI, JINGYI UNIVERSITY OF CHICAGO View publication Active
Pioneering assays for spatially-resolved single-cell multiomics HG013294 HARTOULAROS, GEORGE SURVEY GENOMICS, INC. View publication Active
Smart Laser Capturing Microscope for Genome Wide Single Cell Spatial Transcriptomics HG014004 CANG, HU (contact); SUN, SHA UNIVERSITY OF CALIFORNIA-IRVINE View publication Active
Expansion genomics for high-resolution single-cell and spatial epigenomics HG013679 BUENROSTRO, JASON DANIEL HARVARD UNIVERSITY View publication Active
Developing next-generation high-content image-based genetic screens for multi-omic spatial phenotypes HG013503 WANG, SIYUAN YALE UNIVERSITY View publication Active
A platform for scalable spatial single cell genomics HG010647 CHEN, FEI (contact); MACOSKO, EVAN Z BROAD INSTITUTE, INC. View publication Active
Whole organ transcriptome reconstruction by dimensionality reduced fluorescent in situ hybridization HG012925 WOLLMAN, ROY (contact); LI, JINGYI JESSICA UNIVERSITY OF CALIFORNIA LOS ANGELES View publication Active
Multimodal Analysis of the Genome Architecture Using Expansion Microscopy HG012969 GIRALDEZ, ANTONIO J (contact); BEWERSDORF, JOERG ; WANG, SIYUAN YALE UNIVERSITY View publication Active
Spatially Resolved Molecular Measurement of Biomolecular Condensates HG013358 CHEN, HAIQI UT SOUTHWESTERN MEDICAL CENTER View publication Active
Light-Seq: Spatially targeted profiling of transcriptomic states in cells and tissue HG012926 YIN, PENG HARVARD UNIVERSITY View publication Active
In vivo Perturb-map: scalable genetic screens with single-cell and spatial resolution in intact tissues HG012819 JIN, XIN SCRIPPS RESEARCH INSTITUTE, THE View publication Active
Integrated experimental and statistical tools for ultra-high-throughput spatial transcriptomics HG013180 HAN, HEE-SUN UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN View publication Complete
Orthocoding for Spatial Sequencing HG011231 SALZMAN, JULIA; FORDYCE, POLLY MORRELL; ROHATGI, RAJAT STANFORD UNIVERSITY View publication Complete
A single cell spatial genomics platform for multi-modal characterization of tissue organization HG010647 CHEN, FEI (contact); MACOSKO, EVAN Z BROAD INSTITUTE, INC. View publication Complete
Integrative single-cell spatial genomic, transcriptomic, and epigenetic imaging in mammalian tissue HG011245 WANG, SIYUAN YALE UNIVERSITY View publication Complete

in conjunction with

The Technology Development Coordinating Center is supported by NHGRI Project U24HG011735 and The Jackson Laboratory.

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